1. MANOR::SNR.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  2. MANOR::amplicon.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  3. MANOR::chromosome.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  4. MANOR::clone.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  5. MANOR::control.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  6. MANOR::dapi.snr.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  7. MANOR::dyn.x.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  8. MANOR::dyn.y.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  9. MANOR::dynamics.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  10. MANOR::edge
    Examples of array-CGH data with spatial artifacts
    rda| rds
    arrayCGH
  11. MANOR::edge.norm
    Examples of array-CGH data with spatial artifacts
    rda| rds
    arrayCGH
  12. MANOR::global.spatial.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  13. MANOR::gradient
    Examples of array-CGH data with spatial artifacts
    rda| rds
    arrayCGH
  14. MANOR::gradient.norm
    Examples of array-CGH data with spatial artifacts
    rda| rds
    arrayCGH
  15. MANOR::intensity.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  16. MANOR::local.spatial.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  17. MANOR::num.chromosome.flag
    Internal Functions for MANOR Package
    rda| rds
    flag
  18. MANOR::pct.clone.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  19. MANOR::pct.replicate.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  20. MANOR::pct.spot.before.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  21. MANOR::pct.spot.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  22. MANOR::position.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  23. MANOR::ref.snr.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  24. MANOR::rep.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  25. MANOR::replicate.aux
    Internal Functions for MANOR Package
    json| rda| rds
    function
  26. MANOR::replicate.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  27. MANOR::smoothness.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore
  28. MANOR::spatial.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  29. MANOR::spot.corr.flag
    Internal Functions for MANOR Package
    rda| rds
    flag
  30. MANOR::spot.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  31. MANOR::unique.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  32. MANOR::val.mark.flag
    Examples of flag objects to apply to CGH arrays
    rda| rds
    flag
  33. MANOR::var.replicate.qscore
    Examples of qscore objects (quality scores) to apply to CGH arrays
    rda| rds
    qscore